Predicting 3D genome folding from DNA sequence - Geoff Fudenberg - RegSys - ISMB 2020 Posters
Principles and functional role of 3D genome folding by Prof. Dr. Giacomo Cavalli
The 3D Organization of Our Genome
Marc Marti Renom's Seminar on Technologies to study 3D Genome Folding
Alistair Boettiger: "Visualizing genome folding and gene expression in development."
Jae Young Choi: Unlocking the plant 3D genome architecture with Pore-C sequencing
Detecting higher-order structural changes in 3D genome... - Da-Inn Lee - RegSys - Poster - ISMB 2022
Gesa Loof: "Specific 3D genome topologies distinguish epiblast and primitive endoderm..." - INC
Promoters and Enhancers
ChromFormer: A transformer-based model for 3D genome structure prediction
From 1D to 3D and back: Genome scaffolding from DNA interaction frequency - Noam Kaplan - ISMB 2014
Sequence-based modeling of genome 3D architecture... - Jian Zhou - RegSys - Talk - ISMB/ECCB 2021
Detecting higher-order structural changes in 3D... - Da-Inn Lee - RegSys - Abstract - ISMB 2022
N. Kaplan, "Understanding 3D genome organization with explicit probabilistic models"
J. Mozziconacci, "The 3D genome shapes the regulatory code of developmental genes"
Yijun Ruan – 3D Genome Organization
[EWHA-JAX Joint Symposium] 3D Genome Organization and Transcription
Sequence-based modeling of genome 3D architecture from... - Jian Zhou - ISCBacademy Webinar
What Is AlphaFold? | NEJM
2019 STAT115 Lect14.3 3D Genome Dynamics
6.047/6.878 Lecture 7 - RNA folding, RNA world, RNA structures (Fall 2020)
A robust, sensitive method for analyzing genome sequences in 3D
A look at epigenetics in 3D - Amanda Khoury
DNASTAR - Predict the 3D Structure of a Protein Using NovaFold AI
CCMB Seminar 02/17/2021- Katherine S. Pollard, PhD