MCB 182 Lecture 10.4 - Chromatin conformation capture (Hi-C) assays
MCB 182 Lecture 10.2 - DamID for mapping protein-DNA interactions
MCB 182 Lecture 10.8 - Choosing 3C assay, genome assembly with Hi-C
MCB 182 Lecture 10.3 - Chromatin conformation capture (3C, 4C) assays
MCB 182 Lecture 10.5 - Visualization of Hi-C data, bias in the Hi-C assay
MCB 182 Lecture 11.5 - Co-expression networks
MCB 182 Lecture 11.1 - Introduction to molecular interaction networks
MCB 182 Lecture 10.6 - Topologically associated domains (TADs), A/B compartments
STAT115 Chapter 10.4 Motif Finding General Practices
MCB 182 Lecture 9.7 - Introduction to single cell RNA sequencing (scRNA-seq)
MCB 182 Lecture 10.7 - Chromatin looping, loop extrusion model
MCB 182 Lecture 8.4 - Chromatin accessibility (ATAC-seq)
MCB 182 Lecture 9.13 - scRNA-seq applications (trajectory inference, visualization)
MCB 182 Lecture 1.3 - Review - Transcriptional regulation
STAT115 Chapter 11.1 ChIP-seq
STAT115 Chapter 10.1 Transcription Regulation
DCMB Tools and Technology Seminar 09/10/2015 - Haiming Chen
[Conférence] G. CAVALLI, B. BONEV - Organisation 3D du génome et déterminisme cellulaire
N. Guiglielmoni, "Hic2gfa: phasing assembly graphs with chromosome conformation capture"
Lecture 34: Nucleosomes as barriers, Hi-C, and contact probabilities
MCB 182 Lecture 7.6 - Position weight matrices, sequence logos
Arima Genomics Capture Hi-C
EnHiC: Learning fine-resolution Hi-C contact maps... - Yangyang Hu - RegSys - Talk - ISMB/ECCB 2021
DOVETAIL GENOMICS HiChIP
Physics of your chromosomes