MCB 182 Lecture 10.3 - Chromatin conformation capture (3C, 4C) assays
MCB 182 Lecture 10.8 - Choosing 3C assay, genome assembly with Hi-C
MCB 182 Lecture 10.2 - DamID for mapping protein-DNA interactions
MCB 182 Lecture 10.7 - Chromatin looping, loop extrusion model
MCB 182 Lecture 10.1 - Overview of the physical organization of the genome
MCB 182 Lecture 10.6 - Topologically associated domains (TADs), A/B compartments
MCB 182 Lecture 10.4 - Chromatin conformation capture (Hi-C) assays
(2022) MCB 182 Lecture 9 - Human genetics
MCB 182 Lecture 10.5 - Visualization of Hi-C data, bias in the Hi-C assay
MCB 182 Lecture 1.1 - Review - Genome content
(2022) MCB 182 Lecture 1 - DNA Sequencing
MCB 182 Lecture 8.4 - Chromatin accessibility (ATAC-seq)
STAT115 Chapter 15.2 Methods to Investigate 3D Genome Organization
(2022) MCB 182 Lecture 6 - Transcriptomics
MCB 182 Lecture 12.9 - Fine-mapping causal variants based on GWAS associations
MCB 182 Lecture 9.7 - Introduction to single cell RNA sequencing (scRNA-seq)
scRNA seq Cell cycle regression
MCB 182 Lecture 8.6 - Massively parallel reporter assays (MPRA)
STAT115 Chapter 15.6 Computational Methods to Call Chromatin Loops
Physics of your chromosomes
